JASPAR CORE

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Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2716.1 dreb3 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2717.1 eil2 Solanum lycopersicum EIL
MA2718.1 Sl-ERF_A_3 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2719.1 lat61 Solanum lycopersicum Basic helix-loop-helix factors (bHLH) BES/BZR
MA2720.1 nacnor Solanum lycopersicum GCM domain factors NAC
MA2721.1 Sl-ERF_C_6 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2722.1 Sl-ERF_F_2 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2723.1 Solyc06g060230 Solanum lycopersicum GCM domain factors NAC
MA2724.1 SlTCP18 Solanum lycopersicum TCP
MA2725.1 SlWRKY6 Solanum lycopersicum GCM domain factors WRKY
MA2726.1 SlWRKY41 Solanum lycopersicum GCM domain factors WRKY
MA2727.1 SolycHsfA7 Solanum lycopersicum Heat shock factors HSF
MA2728.1 SolycHsfC1 Solanum lycopersicum Heat shock factors HSF
MA2729.1 vahox1 Solanum lycopersicum Homeo domain factors HD-ZIP
MA2730.1 Solyc01g079480 Solanum lycopersicum Basic leucine zipper factors (bZIP) Group S
MA2731.1 sep3 Solanum lycopersicum MADS box factors MIKC
MA2732.1 Sl-ERF_C_4 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2733.1 Sl-ERF_F_4 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2734.1 Sl-ERF_F_5 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2735.1 SlbHLH014 Solanum lycopersicum Basic helix-loop-helix factors (bHLH) bHLH
MA2736.1 la3 Solanum lycopersicum Basic helix-loop-helix factors (bHLH) bHLH
MA2737.1 SlERF36 Solanum lycopersicum AP2/EREBP ERF/DREB
MA2738.1 Cnr Solanum lycopersicum C3H(C),C2HC zinc-fingers like factors SBP
MA2739.1 SlTCP12 Solanum lycopersicum TCP
MA2740.1 SlTCP15 Solanum lycopersicum TCP
Showing 25 profiles of page 182 from 183 pages

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Scan

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



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inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.