JASPAR CORE

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Total 4279 profiles

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ID Name Species Class Family Sequence logo
MA0921.2 ceh-48 Caenorhabditis elegans Homeo domain factors HD-CUT
MA0922.1 ces-2 Caenorhabditis elegans Basic leucine zipper factors (bZIP) CEBP-related
MA0923.1 lim-4 Caenorhabditis elegans C2H2 zinc finger factors HD-LIM
MA0923.2 lim-4 Caenorhabditis elegans C2H2 zinc finger factors HD-LIM
MA0924.1 pal-1 Caenorhabditis elegans Homeo domain factors HOX
MA0925.1 sma-4 Caenorhabditis elegans SMAD/NF-1 DNA-binding domain factors SMAD factors
MA0925.2 sma-4 Caenorhabditis elegans SMAD/NF-1 DNA-binding domain factors SMAD factors
MA0926.1 unc-86 Caenorhabditis elegans Homeo domain factors POU domain factors
MA0927.1 vab-7 Caenorhabditis elegans Homeo domain factors HOX
MA0928.1 zfh-2 Caenorhabditis elegans Homeo domain factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.