JASPAR CORE

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Total 4279 profiles

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ID Name Species Class Family Sequence logo
MA0075.2 Prrx2 Mus musculus Homeo domain factors Paired-related HD factors
MA0075.3 PRRX2 Homo sapiens Homeo domain factors Paired-related HD factors
MA0075.4 PRRX2 Homo sapiens Homeo domain factors Paired-related HD factors
MA0076.1 ELK4 Homo sapiens Tryptophan cluster factors Ets-related
MA0076.2 ELK4 Homo sapiens Tryptophan cluster factors Ets-related
MA0076.3 ELK4 Homo sapiens Tryptophan cluster factors Ets-related
MA0077.1 SOX9 Homo sapiens High-mobility group (HMG) domain factors SOX-related factors
MA0077.2 SOX9 Homo sapiens High-mobility group (HMG) domain factors SOX-related factors
MA0078.1 Sox17 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
MA0078.2 Sox17 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



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Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.