JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0091.1 TAL1::TCF3 Homo sapiens Basic helix-loop-helix factors (bHLH)::Basic helix-loop-helix factors (bHLH) Tal-related::E2A
MA0091.2 TAL1::TCF3 Homo sapiens Basic helix-loop-helix factors (bHLH)::Basic helix-loop-helix factors (bHLH) Tal-related::E2A
MA0092.1 Hand1::Tcf3 Mus musculus Basic helix-loop-helix factors (bHLH)::Basic helix-loop-helix factors (bHLH) Tal-related::E2A
MA0092.2 Hand1::Tcf3 Mus musculus Basic helix-loop-helix factors (bHLH)::Basic helix-loop-helix factors (bHLH) Tal-related::E2A
MA0093.1 USF1 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0093.2 USF1 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0093.3 USF1 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0093.4 USF1 Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA0094.1 Ubx Drosophila melanogaster Homeo domain factors HOX
MA0094.2 Ubx Drosophila melanogaster Homeo domain factors HOX
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.