JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1711.1 ZNF343 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1711.2 ZNF343 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1712.1 ZNF454 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1712.2 ZNF454 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1713.1 ZNF610 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1713.2 ZNF610 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1714.1 ZNF675 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1714.2 ZNF675 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1715.1 ZNF707 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1716.1 ZNF76 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 10 profiles of page 325 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.