JASPAR CORE

  1. Home
  2. Collection core

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2197.1 bin Drosophila melanogaster Fork head/winged helix factors FOX
MA2198.1 Blimp-1 Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2199.1 bowl Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2200.1 bs Drosophila melanogaster MADS box factors Responders to external signals (SRF/RLM1)
MA2201.1 Bteb2 Drosophila melanogaster C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA2202.1 byn Drosophila melanogaster T-Box factors Brachyury-related factors
MA2203.1 CG12605 Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2204.1 CG4360 Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2205.1 CG7928 Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2206.1 CHES-1-like Drosophila melanogaster Fork head/winged helix factors FOX
Showing 10 profiles of page 403 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.