JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2327.1 PGR Homo sapiens Nuclear receptors with C4 zinc fingers Steroid hormone receptors (NR3)
MA2328.1 ZBED4 Homo sapiens C2H2 zinc finger factors BED zinc finger factors
MA2329.1 ZBTB11 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2330.1 ZBTB24 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2331.1 ZNF157 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2332.1 ZNF175 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2333.1 ZNF35 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2334.1 ZNF547 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2335.1 ZNF558 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA2336.1 ZSCAN21 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 10 profiles of page 416 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.