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Total 4572 profiles

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ID Name Species Class Family Sequence logo
MA1748.1 DREB1F Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1748.2 DREB1F Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1749.1 E2FC Arabidopsis thaliana Fork head/winged helix factors E2F
MA1750.1 E2FE Arabidopsis thaliana Fork head/winged helix factors E2F
MA1751.1 EIL3 Arabidopsis thaliana EIL
MA1751.2 EIL3 Arabidopsis thaliana EIL
MA1752.1 ERF025 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1752.2 ERF025 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1753.1 ERF057 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1753.2 ERF057 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1754.1 ERF073 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1754.2 ERF073 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1755.1 GATA4 Arabidopsis thaliana Other C4 zinc finger-type factors C4-GATA-related
MA1755.2 GATA4 Arabidopsis thaliana Other C4 zinc finger-type factors C4-GATA-related
MA1756.1 GRF9 Arabidopsis thaliana C3H zinc finger factors GRF
MA1756.2 GRF9 Arabidopsis thaliana C3H zinc finger factors GRF
MA1757.1 HDG7 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1757.2 HDG7 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1758.1 HSFA1E Arabidopsis thaliana Heat shock factors HSF
MA1758.2 HSFA1E Arabidopsis thaliana Heat shock factors HSF
MA1759.1 HSFA4A Arabidopsis thaliana Heat shock factors HSF
MA1759.2 HSFA4A Arabidopsis thaliana Heat shock factors HSF
MA1760.1 HSFA6A Arabidopsis thaliana Heat shock factors HSF
MA1761.1 HSFB3 Arabidopsis thaliana Heat shock factors HSF
MA1761.2 HSFB3 Arabidopsis thaliana Heat shock factors HSF
MA1762.1 MYB10 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1762.2 MYB10 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1764.1 MYB116 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1764.2 MYB116 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1765.1 MYB121 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1765.2 MYB121 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1766.1 MYB17 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1766.2 MYB17 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1767.1 MYB23 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1767.2 MYB23 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1768.1 MYB30 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1768.2 MYB30 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1769.1 MYB39 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1769.2 MYB39 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1770.1 MYB40 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1770.2 MYB40 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1771.1 MYB41 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1771.2 MYB41 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1772.1 MYB43 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1772.2 MYB43 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1773.1 MYB51 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1773.2 MYB51 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1774.1 MYB60 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1774.2 MYB60 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1775.1 MYB61 Arabidopsis thaliana Tryptophan cluster factors MYB
Showing 50 profiles of page 67 from 92 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.