JASPAR CORE

  1. Home
  2. Collection core

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2015.1 NAC002 Arabidopsis thaliana GCM domain factors NAC
MA2015.2 NAC002 Arabidopsis thaliana GCM domain factors NAC
MA2016.1 GRF6 Arabidopsis thaliana C3H zinc finger factors GRF
MA2016.2 GRF6 Arabidopsis thaliana C3H zinc finger factors GRF
MA2017.1 JUB1 Arabidopsis thaliana GCM domain factors NAC
MA2017.2 JUB1 Arabidopsis thaliana GCM domain factors NAC
MA2018.1 NAC69 Arabidopsis thaliana GCM domain factors NAC
MA2018.2 NAC69 Arabidopsis thaliana GCM domain factors NAC
MA2019.1 HSFA1B Arabidopsis thaliana Heat shock factors HSF
MA2019.2 HSFA1B Arabidopsis thaliana Heat shock factors HSF
MA2020.1 HSFB4 Arabidopsis thaliana Heat shock factors HSF
MA2020.2 HSFB4 Arabidopsis thaliana Heat shock factors HSF
MA2021.1 LBD13 Arabidopsis thaliana Other C4 zinc finger-type factors LBD
MA2021.2 LBD13 Arabidopsis thaliana Other C4 zinc finger-type factors LBD
MA2022.1 LOB Arabidopsis thaliana Other C4 zinc finger-type factors LBD
MA2022.2 LOB Arabidopsis thaliana Other C4 zinc finger-type factors LBD
MA2023.1 PHL4 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA2023.2 PHL4 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA2024.1 MYB63 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2024.2 MYB63 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2025.1 MYB93 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2025.2 MYB93 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2026.1 MYB108 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2026.2 MYB108 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2027.1 MYB44 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2027.2 MYB44 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2028.1 MYB49 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2028.2 MYB49 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2029.1 MYB88 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2029.2 MYB88 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2030.1 MYB96 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2030.2 MYB96 Arabidopsis thaliana Tryptophan cluster factors MYB
MA2031.1 AT5G04760 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA2031.2 AT5G04760 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA2032.1 TRB1 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA2032.2 TRB1 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA2033.1 NAC038 Arabidopsis thaliana GCM domain factors NAC
MA2033.2 NAC038 Arabidopsis thaliana GCM domain factors NAC
MA2034.1 NAC057 Arabidopsis thaliana GCM domain factors NAC
MA2034.2 NAC057 Arabidopsis thaliana GCM domain factors NAC
MA2035.1 NAC075 Arabidopsis thaliana GCM domain factors NAC
MA2035.2 NAC075 Arabidopsis thaliana GCM domain factors NAC
MA2036.1 NAC076 Arabidopsis thaliana GCM domain factors NAC
MA2036.2 NAC076 Arabidopsis thaliana GCM domain factors NAC
MA2037.1 NAC096 Arabidopsis thaliana GCM domain factors NAC
MA2037.2 NAC096 Arabidopsis thaliana GCM domain factors NAC
MA2038.1 NAC103 Arabidopsis thaliana GCM domain factors NAC
MA2038.2 NAC103 Arabidopsis thaliana GCM domain factors NAC
MA2039.1 ASIL2 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA2039.2 ASIL2 Arabidopsis thaliana Tryptophan cluster factors Trihelix
Showing 50 profiles of page 77 from 86 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.