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Total 4572 profiles

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ID Name Species Class Family Sequence logo
MA1177.1 MYB65 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1177.2 MYB65 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1178.1 MYB3R1 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1178.2 MYB3R1 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1178.3 MYB3R1 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1179.1 MYB1 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1179.2 MYB1 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1180.1 MYB3R4 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1180.2 MYB3R4 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1181.1 MYB113 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1181.2 MYB113 Arabidopsis thaliana Tryptophan cluster factors MYB
MA1182.1 RVE8 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1182.2 RVE8 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1183.1 RVE6 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1183.2 RVE6 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1184.1 RVE1 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1184.2 RVE1 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1185.1 LHY Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1185.2 LHY Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1186.1 YAB4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1186.2 YAB4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1187.1 RVE4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1187.2 RVE4 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1188.1 At3g11280 Arabidopsis thaliana Tryptophan cluster factors MYB-related
MA1189.1 AT5G61620 Arabidopsis thaliana Tryptophan cluster factors MYB-related
Showing 25 profiles of page 93 from 183 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.