JASPAR Collection UNVALIDATED

  1. Home
  2. Collection unvalidated

Total 999 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN0855.1 DEP Arabidopsis thaliana RING
UN0856.1 e_gw1.279.28.1 Physcomitrium patens GCM domain factors NAC
UN0857.1 e_gw1.327.11.1 Physcomitrium patens GCM domain factors NAC
UN0858.1 e_gw1.38.2.1 Physcomitrium patens Fork head/winged helix factors E2F
UN0859.1 estExt_fgenesh1_pg.C_1940033 Physcomitrium patens C3H(C),C2HC zinc-fingers like factors SBP
UN0860.1 estExt_gwp_gw1.C_70211 Physcomitrium patens Homeo domain factors HD-ZIP
UN0861.1 HB88 Zea mays Homeo domain factors WOX
UN0862.1 HAT3 Arabidopsis thaliana Homeo domain factors HD-ZIP
UN0863.1 HMGB10 Arabidopsis thaliana Homeo domain factors ARID
UN0864.1 HOX6 Oryza sativa Homeo domain factors HD-ZIP
Showing 10 profiles of page 99 from 100 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.