Detailed information of matrix profile MA0035.2

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Profile summary
Name: Gata1
Matrix ID: MA0035.2
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 8321207
Uniprot ID: P17679  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 585 311 224 63 107 3835 0 0 1177 424 775 ]
C [ 1099 1360 2296 383 6 109 0 4000 10 1235 1242 ]
G [ 829 897 681 4 0 29 0 0 31 1633 560 ]
T [ 1487 1432 799 3550 3887 27 4000 0 2782 708 1423 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0035.1 MA0035 1 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.2 MA0035 2 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.3 MA0035 3 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.4 MA0035 4 GATA1 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA0035.5 MA0035 5 GATA1 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: