Detailed information of matrix profile MA0035.3

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Profile summary
Name: Gata1
Matrix ID: MA0035.3
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 1638017
Uniprot ID: P17679  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 9399 2600 15789 0 17955 0 17955 17258 2649 8251 9069 ]
C [ 1598 6687 0 0 0 0 0 0 437 2792 2530 ]
G [ 5072 6166 0 17955 0 0 0 697 14869 6406 4321 ]
T [ 1886 2502 2166 0 0 17955 0 0 0 506 2035 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0035.1 MA0035 1 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.2 MA0035 2 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.3 MA0035 3 Gata1 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0035.4 MA0035 4 GATA1 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA0035.5 MA0035 5 GATA1 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0040.1

ChIP-seq Centrality
-log(P-value): 23524.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0040.1

ChIP-seq Centrality
-log(P-value): 23048.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: