Detailed information of matrix profile MA0048.3

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Profile summary
Name: NHLH1
Matrix ID: MA0048.3
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8289804
Uniprot ID: Q02575  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 350 1 2166 0 114 0 0 142 111 ]
C [ 102 2166 4 124 2166 1 0 2166 181 ]
G [ 2166 4 4 2166 301 3 2166 179 2166 ]
T [ 296 2 0 96 0 2166 3 461 788 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0048.1 MA0048 1 NHLH1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA0048.2 MA0048 2 NHLH1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA0048.3 MA0048 3 NHLH1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: