Detailed information of matrix profile MA0062.2

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Profile summary
Name: Gabpa
Matrix ID: MA0062.2
Class: Tryptophan cluster factors
Family: Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 19160518
Uniprot ID: Q91YY8  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 176 49 96 637 0 2 0 0 1 1 1 ]
C [ 224 415 603 37 866 0 1 991 990 4 188 ]
G [ 357 262 137 261 32 2 1 0 0 914 768 ]
T [ 233 264 154 56 94 989 991 0 0 70 32 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0062.1 MA0062 1 GABPA Homo sapiens
Ets-related Tryptophan cluster factors
MA0062.2 MA0062 2 Gabpa Mus musculus
Ets-related Tryptophan cluster factors
MA0062.3 MA0062 3 GABPA Homo sapiens
Ets-related Tryptophan cluster factors
MA0062.4 MA0062 4 GABPA Homo sapiens
Ets-related Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0039.1

ChIP-seq Centrality
-log(P-value): 4151.57

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0039.1

ChIP-seq Centrality
-log(P-value): 4116.48

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: