Detailed information of matrix profile MA0063.2

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Profile summary
Name: NKX2-5
Matrix ID: MA0063.2
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27013732
Uniprot ID: P52952  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1723 1526 96 5246 144 135 222 4819 4931 1485 1827 ]
C [ 1024 1646 5002 48 5098 82 4319 120 165 1406 1251 ]
G [ 1687 1318 24 76 49 61 62 217 98 1478 1084 ]
T [ 1010 954 322 74 153 5166 841 288 250 1075 1282 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0063.1 MA0063 1 Nkx2-5 Mus musculus
NK Homeo domain factors
MA0063.2 MA0063 2 NKX2-5 Homo sapiens
NK Homeo domain factors
MA0063.3 MA0063 3 NKX2-5 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0076.2

ChIP-seq Centrality
-log(P-value): 3363.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0076.2

ChIP-seq Centrality
-log(P-value): 3303.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: