Detailed information of matrix profile MA0068.2

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Profile summary
Name: PAX4
Matrix ID: MA0068.2
Class: Paired box factors
Family: Paired plus homeo domain
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10567552
Uniprot ID: O43316  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 41 12 333 333 0 3 333 105 ]
C [ 333 11 10 5 0 0 120 47 ]
G [ 93 89 11 0 0 2 30 333 ]
T [ 150 333 18 0 333 333 58 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0068.1 MA0068 1 Pax4 Mus musculus
Paired plus homeo domain Paired box factors
MA0068.2 MA0068 2 PAX4 Homo sapiens
Paired plus homeo domain Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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