Detailed information of matrix profile MA0079.5

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Profile summary
Name: SP1
Matrix ID: MA0079.5
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 22021377
Uniprot ID: P08047  
Source: 27852650
Comment:

Sequence logo

Frequency matrix

         
A [ 1 35 1 1 1 1 1 1 47 ]
C [ 836 659 912 997 1 997 997 997 950 ]
G [ 1 52 85 1 731 1 1 1 1 ]
T [ 161 254 1 1 267 1 1 1 1 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0079.1 MA0079 1 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.2 MA0079 2 SP1 Homo sapiens
Mus musculus
Rattus norvegicus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.3 MA0079 3 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.4 MA0079 4 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0079.5 MA0079 5 SP1 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0712.1

ChIP-seq Centrality
-log(P-value): 1914.66

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0712.1

ChIP-seq Centrality
-log(P-value): 2422.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: