Detailed information of matrix profile MA0153.1

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Profile summary
Name: HNF1B
Matrix ID: MA0153.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens Mus musculus
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P35680  
Source:
Comment: Annotations from PAZAR HNF1B_HUMAN + HNF1B_MOUSE (TF0000780, TF0000782) in the TFe project.

Sequence logo

Frequency matrix

         
A [ 0 0 8 7 0 5 3 0 0 8 9 0 ]
C [ 3 3 1 1 0 0 0 0 0 0 0 8 ]
G [ 0 0 0 1 0 4 1 1 0 1 0 0 ]
T [ 6 6 0 0 9 0 5 8 9 0 0 1 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0153.1 MA0153 1 HNF1B Homo sapiens
Mus musculus
POU domain factors Homeo domain factors
MA0153.2 MA0153 2 HNF1B Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: HNF1 homeobox B

Alias: LFB3,VHNF1,HNF1beta,MODY5

Symbol: HNF1B

Consensus:

Included Models:

GC Content: