Detailed information of matrix profile MA0159.1

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Profile summary
Name: RARA::RXRA
Matrix ID: MA0159.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P10276   P19793  
Source:
Comment: Dimer. Annotations from PAZAR RXR/RAR_HUMAN (TF0000788) in the RARE project.

Sequence logo

Frequency matrix

         
A [ 1 2 17 6 1 0 0 2 3 1 7 0 2 22 9 0 0 ]
C [ 1 3 3 16 20 3 12 7 11 9 5 1 3 1 13 23 11 ]
G [ 0 17 1 1 1 3 6 1 4 8 7 0 18 0 0 0 0 ]
T [ 21 1 2 0 1 17 5 13 5 5 4 22 0 0 1 0 12 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0159.1 MA0159 1 RARA::RXRA Homo sapiens
Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: -

Alias: -

Symbol: -

Consensus:

Included Models:

GC Content: