Detailed information of matrix profile MA0486.1

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Profile summary
Name: HSF1
Matrix ID: MA0486.1
Class: Heat shock factors
Family: HSF factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17500587
Uniprot ID: Q00613  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 113 5 208 187 57 45 18 11 0 1 144 0 203 179 62 ]
C [ 18 2 4 9 67 73 15 3 225 89 6 2 8 12 56 ]
G [ 88 218 5 16 62 63 6 24 0 7 71 222 11 26 82 ]
T [ 6 0 8 13 39 44 186 187 0 128 4 1 3 8 25 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0486.1 MA0486 1 HSF1 Homo sapiens
HSF factors Heat shock factors
MA0486.2 MA0486 2 HSF1 Homo sapiens
HSF factors Heat shock factors
     

-log(P-value) = 226.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: heat shock transcription factor 1

Alias: HSTF1

Symbol: HSF1

Consensus:

Included Models:

GC Content: