Detailed information of matrix profile MA0556.1

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Profile summary
Name: AP3
Matrix ID: MA0556.1
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 8774892
Uniprot ID: P35632  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 92 84 48 0 185 217 283 240 156 95 98 7 183 231 243 ]
C [ 36 33 241 232 61 22 0 1 10 0 2 0 56 18 9 ]
G [ 20 39 0 1 11 11 0 0 104 30 191 284 5 9 19 ]
T [ 143 135 2 58 34 41 8 50 21 166 0 0 47 33 20 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0556.1 MA0556 1 AP3 Arabidopsis thaliana
Type II MADS box factors
MA0556.2 MA0556 2 AP3 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: