Detailed information of matrix profile MA0557.1

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Profile summary
Name: FHY3
Matrix ID: MA0557.1
Class: GCM domain factors
Family: FRS/FRF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 21803941
Uniprot ID: Q9LIE5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 59 64 162 3 3 15 3 2 4 7 77 68 ]
C [ 50 40 17 6 228 0 213 1 2 9 25 40 ]
G [ 44 68 40 208 0 220 16 230 3 210 58 81 ]
T [ 82 63 16 18 4 0 3 2 226 9 75 46 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0557.1 MA0557 1 FHY3 Arabidopsis thaliana
FRS/FRF GCM domain factors
MA0557.2 MA0557 2 FHY3 Arabidopsis thaliana
FRS/FRF GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0481.1

ChIP-seq Centrality
-log(P-value): 472.436

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0481.1

ChIP-seq Centrality
-log(P-value): 492.348

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: