Detailed information of matrix profile MA0603.1

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Profile summary
Name: Arntl
Matrix ID: MA0603.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 7592839
Uniprot ID: Q9WTL8  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 251 246 62 3 953 2 48 54 9 255 ]
C [ 229 125 44 997 16 965 3 58 4 331 ]
G [ 261 558 143 0 10 9 946 51 938 146 ]
T [ 259 71 752 0 21 24 3 837 48 268 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0603.1 MA0603 1 Arntl Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
MA0603.2 MA0603 2 Arntl Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0162.1

ChIP-seq Centrality
-log(P-value): 402.392

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0162.1

ChIP-seq Centrality
-log(P-value): 373.002

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: