Detailed information of matrix profile MA0708.1

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Profile summary
Name: MSX2
Matrix ID: MA0708.1
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P35548  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 517 105 3400 3400 0 52 3400 1198 ]
C [ 1688 2592 161 28 0 169 61 791 ]
G [ 835 44 67 0 0 72 0 892 ]
T [ 360 807 84 0 3400 3400 21 518 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0708.1 MA0708 1 MSX2 Homo sapiens
NK Homeo domain factors
MA0708.2 MA0708 2 MSX2 Homo sapiens
NK Homeo domain factors
MA0708.3 MA0708 3 MSX2 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: