Detailed information of matrix profile MA0713.1

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Profile summary
Name: PHOX2A
Matrix ID: MA0713.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: O14813  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1657 11434 11434 132 437 6855 6130 11434 5 1001 11434 ]
C [ 816 81 2 309 1896 806 2300 629 34 1539 497 ]
G [ 229 778 10 199 717 4580 5304 4424 0 225 1240 ]
T [ 11434 1135 0 11434 11434 1262 639 1362 11434 11434 2164 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0713.1 MA0713 1 PHOX2A Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0773.1

ChIP-seq Centrality
-log(P-value): 298.32

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0773.1

ChIP-seq Centrality
-log(P-value): 262.424

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: