Detailed information of matrix profile MA0734.1

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Profile summary
Name: GLI2
Matrix ID: MA0734.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2105456
Uniprot ID: P10070  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 308 1437 137 109 5 14 4 8 15 36 83 203 ]
C [ 1437 215 92 233 9 6 8 6 29 1437 116 1437 ]
G [ 221 117 1437 386 1437 21 1437 1437 148 10 1437 184 ]
T [ 843 671 314 709 5 1437 0 6 1437 16 128 348 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0734.1 MA0734 1 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.2 MA0734 2 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.3 MA0734 3 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.4 MA0734 4 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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