Detailed information of matrix profile MA0734.2

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Profile summary
Name: GLI2
Matrix ID: MA0734.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2105456
Uniprot ID: P10070  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 777 5871 7647 1146 841 24 152 0 0 302 1 8 0 728 1607 ]
C [ 15481 1368 3253 13225 694 539 13 0 0 97 0 0 1758 15957 4702 ]
G [ 1257 9203 1810 4113 15453 7 16216 15079 16444 675 16442 16427 2886 215 4901 ]
T [ 503 4438 7613 3354 1207 16175 167 3319 0 15762 0 0 14096 88 5234 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0734.1 MA0734 1 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.2 MA0734 2 GLI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.3 MA0734 3 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0734.4 MA0734 4 Gli2 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: