Detailed information of matrix profile MA0755.1

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Profile summary
Name: CUX2
Matrix ID: MA0755.1
Class: Homeo domain factors
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 7799919
Uniprot ID: O14529  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 11171 12097 45569 191 395 736 45569 345 12191 45569 ]
C [ 5056 7587 66 163 31803 94 485 540 23534 4247 ]
G [ 9534 11730 278 69 208 45569 1841 250 5067 4573 ]
T [ 19809 45569 396 45569 13767 74 479 45569 45569 8111 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0755.1 MA0755 1 CUX2 Homo sapiens
HD-CUT Homeo domain factors
MA0755.2 MA0755 2 CUX2 Homo sapiens
HD-CUT Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0782.1

ChIP-seq Centrality
-log(P-value): 724.793

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0782.1

ChIP-seq Centrality
-log(P-value): 668.907

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: