Detailed information of matrix profile MA0800.1

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Profile summary
Name: EOMES
Matrix ID: MA0800.1
Class: T-Box factors
Family: TBrain-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12093383
Uniprot ID: O95936  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2800 4183 3781 3351 24 980 9832 3 9832 94 1305 653 2122 ]
C [ 1954 1966 2941 1022 99 9832 98 9832 50 9832 9832 1259 2274 ]
G [ 2577 1960 4337 1956 28 550 1540 8 600 92 1004 158 911 ]
T [ 2501 5649 9832 9832 9832 210 495 9 19 23 1775 9832 4526 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0800.1 MA0800 1 EOMES Homo sapiens
TBrain-related factors T-Box factors
MA0800.2 MA0800 2 EOMES Homo sapiens
TBrain-related factors T-Box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0171.1

ChIP-seq Centrality
-log(P-value): 4029.45

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0171.1

ChIP-seq Centrality
-log(P-value): 3871.58

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: