Detailed information of matrix profile MA0878.3

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Profile summary
Name: CDX1
Matrix ID: MA0878.3
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 18585359
Uniprot ID: P47902  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 1088 527 11 4822 8617 0 8617 8617 8617 7199 ]
C [ 884 355 4868 3795 0 0 56 72 0 1418 ]
G [ 7528 8090 0 0 344 0 0 97 0 754 ]
T [ 1076 131 3749 355 0 8617 230 29 0 854 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0878.1 MA0878 1 CDX1 Homo sapiens
HOX Homeo domain factors
MA0878.2 MA0878 2 CDX1 Homo sapiens
HOX Homeo domain factors
MA0878.3 MA0878 3 CDX1 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: