Detailed information of matrix profile MA0921.1

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Profile summary
Name: ceh-48
Matrix ID: MA0921.1
Class: Homeo domain factors
Family: HD-CUT
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 22080565
Uniprot ID: O45080  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 261 203 974 68 66 62 534 224 194 ]
C [ 182 128 0 0 511 55 54 196 268 ]
G [ 214 135 0 1 36 789 358 138 143 ]
T [ 342 535 26 931 386 95 54 442 395 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0921.1 MA0921 1 ceh-48 Caenorhabditis elegans
HD-CUT Homeo domain factors
MA0921.2 MA0921 2 ceh-48 Caenorhabditis elegans
HD-CUT Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0457.1

ChIP-seq Centrality
-log(P-value): 259.084

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0457.1

ChIP-seq Centrality
-log(P-value): 191.209

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: