Detailed information of matrix profile MA0923.1

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Profile summary
Name: lim-4
Matrix ID: MA0923.1
Class: C2H2 zinc finger factors
Family: HD-LIM
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 18585360
Uniprot ID: G5EEA1  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 103 38 839 985 2 11 681 181 176 ]
C [ 331 13 49 3 12 20 6 304 312 ]
G [ 52 10 103 4 7 117 291 403 238 ]
T [ 514 939 10 7 980 852 22 112 274 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0923.1 MA0923 1 lim-4 Caenorhabditis elegans
HD-LIM C2H2 zinc finger factors
MA0923.2 MA0923 2 lim-4 Caenorhabditis elegans
HD-LIM C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: