Detailed information of matrix profile MA1027.1

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Profile summary
Name: KAN1
Matrix ID: MA1027.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24464295
Uniprot ID: Q93WJ9  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 44 648 840 20 623 323 242 200 ]
C [ 18 169 19 68 58 43 285 237 ]
G [ 876 147 87 14 192 16 213 129 ]
T [ 63 36 54 898 128 618 259 433 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1027.1 MA1027 1 KAN1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1027.2 MA1027 2 KAN1 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0513.1

ChIP-seq Centrality
-log(P-value): 422.16

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0513.1

ChIP-seq Centrality
-log(P-value): 450.867

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: