Detailed information of matrix profile MA1471.1

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Profile summary
Name: BARX2
Matrix ID: MA1471.1
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10051657
Uniprot ID: Q9UMQ3  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 5260 4259 28388 28388 0 3452 11453 2847 7507 9871 11426 6494 ]
C [ 7422 415 0 41 10009 5135 1342 2920 99 47 3632 6745 ]
G [ 9281 325 2051 0 49 28388 16934 3348 30 69 3613 6473 ]
T [ 6425 28388 19 7 28388 15759 2814 28388 28388 18517 16962 8675 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1471.1 MA1471 1 BARX2 Homo sapiens
NK Homeo domain factors
MA1471.2 MA1471 2 BARX2 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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