Detailed information of matrix profile MA1846.2

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Profile summary
Name: Brachyury
Matrix ID: MA1846.2
Class: T-Box factors
Family: Brachyury-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 26684323
Uniprot ID: Q4H3U3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 53 130 713 14 919 43 130 114 ]
C [ 56 711 56 961 27 877 658 146 ]
G [ 23 107 178 7 41 28 104 44 ]
T [ 868 53 53 18 13 52 108 696 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1846.1 MA1846 1 Brachyury Ciona intestinalis
Brachyury-related factors T-Box factors
MA1846.2 MA1846 2 Brachyury Ciona intestinalis
Brachyury-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: