Detailed information of matrix profile UN0206.2

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Profile summary

Name: ZNF580
Matrix ID: UN0206.2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9UK33  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1789 3 1 3888 0 0 0 22 3559 3888 3862 469 1872 2284 273 87 3888 0 0 ]
C [ 237 0 0 0 58 1 0 3 261 0 0 20 45 180 720 0 0 3835 3888 ]
G [ 1822 0 0 0 0 3889 125 2 31 2 23 45 230 981 59 0 2 0 0 ]
T [ 176 3888 3888 1 3848 0 3789 3878 236 0 11 3364 1824 443 2988 3820 1 98 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0205.1 UN0205 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.1 UN0206 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.2 UN0206 2 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: