Detailed information of matrix profile UN0424.1

This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: LEC1-A
Matrix ID: UN0424.1
Class: Heteromeric CCAAT-binding factors
Family: NF-YB
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation:
Uniprot ID: B5KMS8  
Source: 28739919
Comment: TF has several motif variants. The ab used for ChIP was done using recombinant protein containing regions shared by LEC1-A and LEC1-B. Therefore the profile could be for either or both LEC1-A and B.

Sequence logo

Frequency matrix

A [ 6015 5640 209 16937 420 17522 741 12654 699 5298 4745 ]
C [ 3447 3307 141 766 17337 455 16842 821 713 2900 3654 ]
G [ 4587 3454 17815 422 540 357 508 4176 590 6859 3845 ]
T [ 4900 6548 784 824 652 615 858 1298 16947 3892 6705 ]

Binding sites information

External links