JASPAR - LEC1-A - UN0424.1 - profile summary

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Profile summary

Name:	LEC1-A
Matrix ID:	UN0424.1
Class:	Heteromeric CCAAT-binding factors
Family:	NF-YB
Collection:	UNVALIDATED
Taxon:	Plants
Species:	Glycine max
Data Type:	ChIP-seq
Validation:
Uniprot ID:	B5KMS8
Source:	28739919
Comment:	TF has several motif variants. The ab used for ChIP was done using recombinant protein containing regions shared by LEC1-A and LEC1-B. Therefore the profile could be for either or both LEC1-A and B.

Sequence logo

Frequency matrix

A [	6705	3892	16947	1298	858	615	652	824	784	6548	4900	]
C [	3845	6859	590	4176	508	357	540	422	17815	3454	4587	]
G [	3654	2900	713	821	16842	455	17337	766	141	3307	3447	]
T [	4745	5298	699	12654	741	17522	420	16937	209	5640	6015	]

Binding sites information

External links

Matrix ID	Base ID	Version	Name	Species	Family	Class
UN0422.1	UN0422	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0423.1	UN0423	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0424.1	UN0424	1	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0422.2	UN0422	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0423.2	UN0423	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors
UN0424.2	UN0424	2	LEC1-A	Glycine max	NF-YB	Heteromeric CCAAT-binding factors