Detailed information of matrix profile UN0460.1

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Profile summary

Name: Osr1-2-b
Matrix ID: UN0460.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 241 144 233 200 391 213 145 292 7 64 935 8 7 357 297 214 258 239 202 190 ]
C [ 240 221 370 249 200 389 573 9 20 18 4 5 889 211 202 274 270 234 243 151 ]
G [ 326 390 218 159 164 242 62 689 960 29 50 984 25 177 328 244 216 340 398 355 ]
T [ 193 246 179 392 246 156 220 10 13 889 10 3 78 254 173 267 257 187 157 304 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0460.1 UN0460 1 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0460.2 UN0460 2 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: