Detailed information of matrix profile UN0460.2

  1. Home
  2. Matrix > UN0460.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: Osr1-2-b
Matrix ID: UN0460.2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 145 292 7 64 935 8 7 ]
C [ 573 9 20 18 4 5 889 ]
G [ 62 689 960 29 50 984 25 ]
T [ 220 10 13 889 10 3 78 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0460.1 UN0460 1 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0460.2 UN0460 2 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: