Detailed information of matrix profile UN0477.1

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Profile summary

Name: ZF-C2H2-10
Matrix ID: UN0477.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K8  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 287 318 561 128 366 238 116 660 53 123 26 38 33 895 14 148 194 166 231 266 193 223 ]
C [ 158 152 118 91 107 157 96 41 62 138 22 822 63 25 24 73 177 239 243 176 237 229 ]
G [ 261 136 129 149 341 279 486 216 28 121 20 39 55 58 11 598 346 307 274 254 254 285 ]
T [ 294 394 192 632 187 326 303 84 856 618 932 100 849 22 951 181 283 289 252 304 317 263 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0477.1 UN0477 1 ZF-C2H2-10 Ciona intestinalis
C2H2 zinc finger factors
UN0477.2 UN0477 2 ZF-C2H2-10 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: