Detailed information of matrix profile UN0478.1

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Profile summary

Name: ZF-C2H2-15
Matrix ID: UN0478.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K3  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 307 278 369 393 481 384 591 911 99 900 48 815 41 272 322 307 287 212 238 210 ]
C [ 236 255 210 206 168 333 76 20 14 58 24 146 17 547 101 311 196 229 366 315 ]
G [ 246 249 217 191 165 149 251 45 872 25 917 11 922 88 399 244 321 394 223 264 ]
T [ 211 218 205 210 186 134 81 23 14 17 10 27 20 93 178 138 197 165 173 210 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0478.1 UN0478 1 ZF-C2H2-15 Ciona intestinalis
C2H2 zinc finger factors
UN0478.2 UN0478 2 ZF-C2H2-15 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: