Detailed information of matrix profile UN0485.1

  1. Home
  2. Matrix > UN0485.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ALX4::TBX21
Matrix ID: UN0485.1
Class: Homeo domain factors::T-Box factors
Family: Paired-related HD factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O35137   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 12970 1639 8 0 0 1332 2508 15021 15021 753 6560 10975 ]
C [ 4 1616 123 2028 0 7244 1598 0 872 673 1485 2008 ]
G [ 2050 15021 15021 20 15021 418 3375 492 8 823 1350 4045 ]
T [ 837 891 179 15021 0 7777 15021 3 6 15021 8461 2219 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0485.1 UN0485 1 ALX4::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: