Detailed information of matrix profile UN0486.1

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Profile summary

Name: CUX1::HOXA13
Matrix ID: UN0486.1
Class: Homeo domain factors
Family: HD-CUT::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P31271   P39880  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 556 0 10 52 556 7 20 487 35 29 22 163 305 1 556 556 556 ]
C [ 0 0 556 32 0 0 245 26 245 290 275 556 17 15 261 41 4 ]
G [ 6 0 0 505 0 19 6 15 44 221 39 108 251 16 35 16 20 ]
T [ 48 556 57 2 9 556 285 28 232 16 281 171 10 556 125 63 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0486.1 UN0486 1 CUX1::HOXA13 Homo sapiens
HD-CUT::HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: