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322 profile(s) found

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ID Name Species Class Family Logo
MA0276.1 ASH1 Saccharomyces cerevisiae
 Other C4 zinc finger-type factors C4-GATA-related
MA0277.1 AZF1 Saccharomyces cerevisiae
 C2H2 zinc finger factors
MA0278.1 BAS1 Saccharomyces cerevisiae
 Tryptophan cluster factors Myb/SANT domain factors
MA0278.2 BAS1 Saccharomyces cerevisiae
 Tryptophan cluster factors Myb/SANT domain factors
MA0279.1 CAD1 Saccharomyces cerevisiae
 Basic leucine zipper factors (bZIP)
MA0279.2 CAD1 Saccharomyces cerevisiae
 Basic leucine zipper factors (bZIP)
MA0279.3 CAD1 Saccharomyces cerevisiae
 Basic leucine zipper factors (bZIP)
MA0280.1 CAT8 Saccharomyces cerevisiae
 C6 zinc cluster factors
MA0280.2 CAT8 Saccharomyces cerevisiae
 C6 zinc cluster factors
MA0281.1 CBF1 Saccharomyces cerevisiae
 Basic helix-loop-helix factors (bHLH) bHLH-ZIP
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


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Download the PFMs of the model(s) selected in four different formats.