Detailed information of matrix profile MA0281.1

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Profile summary
Name: CBF1
Matrix ID: MA0281.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae
Data Type: PBM, CSA and/or DIP-chip
Validation: 19111667
Uniprot ID: P17106  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 3 100 0 0 0 0 72 ]
C [ 8 92 0 100 0 0 0 17 ]
G [ 53 3 0 0 100 0 100 6 ]
T [ 19 3 0 0 0 100 0 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0281.1 MA0281 1 CBF1 Saccharomyces cerevisiae
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0281.2 MA0281 2 CBF1 Saccharomyces cerevisiae
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0281.3 MA0281 3 CBF1 Saccharomyces cerevisiae
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0452.1

ChIP-seq Centrality
-log(P-value): 601.876

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0452.1

ChIP-seq Centrality
-log(P-value): 617.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: