JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1101.1 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1101.2 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1101.3 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1102.1 CTCFL Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1102.2 CTCFL Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1102.3 CTCFL Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1103.1 FOXK2 Homo sapiens Fork head/winged helix factors FOX
MA1103.2 FOXK2 Homo sapiens Fork head/winged helix factors FOX
MA1103.3 FOXK2 Homo sapiens Fork head/winged helix factors FOX
MA1104.1 GATA6 Homo sapiens Other C4 zinc finger-type factors C4-GATA-related
Showing 10 profiles of page 215 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.