Detailed information of matrix profile MA1100.2

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Profile summary
Name: ASCL1
Matrix ID: MA1100.2
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD/ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20382226
Uniprot ID: P50553  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1267 1334 0 4413 107 729 118 52 177 843 ]
C [ 926 521 4413 157 1288 4413 24 0 3065 1487 ]
G [ 1495 3079 0 60 4413 1320 121 4413 814 889 ]
T [ 726 354 14 218 625 20 4413 29 1349 1194 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1100.1 MA1100 1 ASCL1 Homo sapiens
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
MA1100.2 MA1100 2 ASCL1 Homo sapiens
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
MA1100.3 MA1100 3 ASCL1 Homo sapiens
MyoD/ASC-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0131.2

ChIP-seq Centrality
-log(P-value): 40944.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0131.2

ChIP-seq Centrality
-log(P-value): 40958.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: