JASPAR CORE

  1. Home
  2. Collection core

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1458.1 Hsf Drosophila melanogaster Heat shock factors HSF factors
MA1458.2 Hsf Drosophila melanogaster Heat shock factors HSF factors
MA1459.1 M1BP Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1459.2 M1BP Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1460.1 pho Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1460.2 pho Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1461.1 sv Drosophila melanogaster Paired box factors Paired domain only
MA1461.2 sv Drosophila melanogaster Paired box factors Paired domain only
MA1462.1 vfl Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1462.2 vfl Drosophila melanogaster C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1463.1 ARGFX Homo sapiens Homeo domain factors Paired-related HD factors
MA1463.2 ARGFX Homo sapiens Homeo domain factors Paired-related HD factors
MA1464.1 ARNT2 Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA1464.2 ARNT2 Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA1466.1 ATF6 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1466.2 ATF6 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1467.1 ATOH1 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1467.2 Atoh1 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1467.3 Atoh1 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1468.1 ATOH7 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1470.1 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1470.2 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1471.1 BARX2 Homo sapiens Homeo domain factors NK
MA1471.2 BARX2 Homo sapiens Homeo domain factors NK
MA1472.1 BHLHA15 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
Showing 25 profiles of page 113 from 172 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.